Interdisciplinary Laboratory of Biological Systems Modelling
kierownik zespołu:
Joanna Sułkowska, PhD

Team

mgr inż. Agata Bernat
mgr Paweł Dąbrowski-Tumański
doktorant, wydział Chemii
Aleksandra Gierut
studentka, Wydz. Informatyki, Uniwersytet Jagielloński
dr Rafał Jakubowski
mgr Aleksandra Jarmolińska
doktorantka, MISDoMP
Jacek Kędzierski
student, MISMAP
Joanna Macner
studentka, MISMaP
mgr Maria Marchwicka
doktorantka, Uniwersytet im. Adama Mickiewicza
dr Wanda Niemyska
Uniwersytet Śląski
mgr Anna Nowicka
doktorantka, Wydz. Fizyki
mgr Agata Perlińska
doktorantka, MISDoMP
Mateusz Skłodowski
student, Wydz. Chemii
dr Vasilina Zayas

O laboratorium

Scientific interests:
  • development of multi dimensional models for the analysis of energy landscape of proteins with complex structures, as proteins with non trivial topology; 
  • development of analytical methods as direct coupling analysis (DCA) and bioinformatics tools for analysis of amino acids evolution and their application to prediction of protein structures (including membrane proteins) and alternative protein folding mechanism;   
  • development of the methods to analysis of mechanical properties of proteins, mechanical degradation and translation across membranes; 
  • development and application of mathematical knot theory to determine the topology of open chain and its application to proteins and nucleic acids.

Co-organization of scientific events:

  • 17-21.09.214, Significance of Knotted Structures for Function of Proteins and Nucleic Acids, Warsaw, Poland
  • 17-20.06.2014, 4th Visegrad Symposium on Structural Systems Biology, Nove Hrady, Czech Republic
  • 17-22.11.2013, Entanglement in biology; how nature controls the topology of proteins and DNA (13w5133), Banff, Canada

Other grants:

  • DUNE, Ministry of Science and Higher Education, place of implementation: Polish Biophysical Society
  • Biophysical Society Grant, place of implementation: Faculty of Chemistry UW
  • Homing Plus, Fundation for Polish Science, place of implementation: Faculty of Chemistry UW
  • Preludium, National Science Centre, place of implementation: Faculty of Chemistry UW
Współpraca krajowa:
  • prof. Andrzej Kolinski, Faculty of Chemistry, University of Warsaw
  • Dominik Gront, PhD, Faculty of Chemistry, University of Warsaw
  • Wanda Niemyska, MSc, Faculty of Mathematics, Informatics and Mechanics, University of Warsaw
Współpraca zagraniczna:
  • prof. Jose Onuchic, Center for Theoretical Biological Physics, Rice University, USA
  • Jeff Noel, PhD, Center for Theoretical Biological Physics,Rice University, USA
  • prof. Pattrica Jennings, Department of Biochemistry, University of California, San Diego, USA
  • Ellinor Haglund, PhD, Department of Biochemistry, University of California, San Diego, USA
  • prof. Ken Millett, Department of Mathematics, University of California, Santa Barbara, USA
  • prof. Eric J. Rawdon, Department of Mathematics, University of St. Thomas, USA
  • prof. Sophie Jackson, University of Cambridge, UK
  • Andrzej Stasiak, PhD, Center for Integrative Genomics, Faculty of Biology and Medicine, University of Lausanne, Switzerland

News

Friday, March 10, 2017 - 14:55
Joanna Sułkowska, PhD, DSc, the head of the Interdisciplinary Laboratory of Biological Systems Modelling, is among 15 young female scientists who received the International...
Tuesday, December 13, 2016 - 16:11
Marcin Witkowski, a member of the Laboratory of Technology of Novel Functional Materials, student of the Faculty of Physics, Anna Dawid from Laboratory of Quantum Molecular...
Monday, November 28, 2016 - 09:43

In this year edition, Joanna Sułkowska, PhD, the head of the Interdisciplinary Laboratory of Biological Systems Modelling, achieved postdoctoral scholarship in the amount of 35...

Tuesday, September 20, 2016 - 10:10

On 13 - 16 of September the 2nd Congress of Polish Biochemistry, Cell biology, Biotechnology and Bioinformatics Bio2016 – Expanding beyond the limits was held in...

Tuesday, August 16, 2016 - 14:48

Aleksandra Jarmolińska, a member of the Interdisciplinary Laboratory of Biological Modeling Systems, took 12th place at the Olympic Games in Rio de Janeiro in skeet!

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